Hello and
If you want to establish a true biological filter (beneficial bacteria that convert fish waste into harmless byproducts) you need to remove your ammo chips. They remove the food source (ammonia) that the beneficial bacteria need to multiply. Also, using ammo chips prevents you from being able to use salt to treat disease (because the salt causes the ammo chips to release all the ammonia they've absorbed). If you elect to pursue this route, please read up on cycling your aquarium (lots of info on this site).
In my Emperor 280, I have the original blue and white filter pad which I've cut at the bottom and knocked all the carbon out of (I periodically rinse the "gunk" off this filter in tank water in a bucket). I have filled the clam shell thingie with pieces of sponge from a filter I had on another tank and in the back I have crammed a net bag full of ceramic ring biomedia. The ceramic rings should never need to be replaced and you only really need to replace the filter pad when it really begins to fall apart.
Good luck!